Our Bioinformatics facility is equipped with state-of-the art systems and is capable of providing complete analysis package (primary, secondary & tertiary components) on a project–to–project basis.

Below is the list of various data analyses that can be performed at our facility :

Exome Data Analysis

• Quality check & Filtering
• Read Alignment to reference genome
• Variant Calling
• Comprehensive disease & common variant annotation

De Novo Transcriptome Analysis

• Quality check & Filtering
• Read Alignment
• Contig Expression estimation
• Differential Gene expression (if multiple samples available)
• BLASTX annotation
• UniProt & NCBI protein annotation
• Gene Ontology (GO) annotation

16S-rRNA Metagenomics Analysis

• Quality check & Filtering
• Identification of rRNA sequence from reads
• OTUs identification
• Taxonomy classification & relative abundance
• Alpha diversity and rarefaction curves
• Beta diversity calculation (if multiple samples available)

Whole Genome Re-Sequencing

• Quality check & Filtering
• Read Alignment to reference genome
• Variant calling
• Variant annotation
• Common & disease variant annotation

De Novo Whole Genome Analysis

• Quality check & Filtering
• Read assembly
• Gene prediction
• Gene annotation
• Advanced annotation & analysis

ChIP-Seq Analysis

• Quality check & Filtering
• Read Alignment to reference genome
• Significant enriched region & peak prediction
• Annotation of peaks
• Binding site identification